Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup54Q8BTS4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.43■□□□□ 0.7
Nup54Q8BTS4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Nup54Q8BTS4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup54Q8BTS4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup54Q8BTS4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Nup54Q8BTS4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Nup54Q8BTS4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.39■□□□□ 0.69
Nup54Q8BTS4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms