Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Gm45417-201ENSMUST00000209533 758 ntBASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc40Q8BI79 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Gm6139-201ENSMUST00000079261 882 ntBASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc40Q8BI79 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Gm11421-201ENSMUST00000122124 294 ntBASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ccdc40Q8BI79 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc40Q8BI79 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc40Q8BI79 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Golph3-205ENSMUST00000228671 2842 ntBASIC19.64■□□□□ 0.73
Ccdc40Q8BI79 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc40Q8BI79 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc40Q8BI79 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc40Q8BI79 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc40Q8BI79 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms