Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RfflQ6ZQM0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RfflQ6ZQM0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Gm13238-201ENSMUST00000117655 780 ntBASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RfflQ6ZQM0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RfflQ6ZQM0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RfflQ6ZQM0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Etf1-202ENSMUST00000180351 108 ntBASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RfflQ6ZQM0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RfflQ6ZQM0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RfflQ6ZQM0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RfflQ6ZQM0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RfflQ6ZQM0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RfflQ6ZQM0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RfflQ6ZQM0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RfflQ6ZQM0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RfflQ6ZQM0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RfflQ6ZQM0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RfflQ6ZQM0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms