Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd3Q6P9Z1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd3Q6P9Z1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcd3Q6P9Z1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd3Q6P9Z1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcd3Q6P9Z1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcd3Q6P9Z1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms