Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtl3Q6P1Y1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rtl3Q6P1Y1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rtl3Q6P1Y1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rtl3Q6P1Y1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtl3Q6P1Y1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtl3Q6P1Y1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtl3Q6P1Y1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtl3Q6P1Y1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Gm13146-201ENSMUST00000118508 780 ntBASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtl3Q6P1Y1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtl3Q6P1Y1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtl3Q6P1Y1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Gm12933-201ENSMUST00000120203 872 ntBASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtl3Q6P1Y1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms