Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VclQ64727 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.62■□□□□ 0.57
VclQ64727 Gm27405-201ENSMUST00000184201 112 ntBASIC18.62■□□□□ 0.57
VclQ64727 Gm38205-201ENSMUST00000192243 258 ntBASIC18.62■□□□□ 0.57
VclQ64727 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.62■□□□□ 0.57
VclQ64727 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VclQ64727 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.62■□□□□ 0.57
VclQ64727 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VclQ64727 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VclQ64727 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VclQ64727 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VclQ64727 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VclQ64727 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VclQ64727 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.6■□□□□ 0.57
VclQ64727 Golph3-202ENSMUST00000226517 2359 ntBASIC18.6■□□□□ 0.57
VclQ64727 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VclQ64727 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VclQ64727 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VclQ64727 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VclQ64727 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.6■□□□□ 0.57
VclQ64727 Gm7291-201ENSMUST00000199147 382 ntBASIC18.6■□□□□ 0.57
VclQ64727 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VclQ64727 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VclQ64727 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VclQ64727 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VclQ64727 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VclQ64727 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VclQ64727 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VclQ64727 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
VclQ64727 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VclQ64727 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VclQ64727 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.58■□□□□ 0.57
VclQ64727 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VclQ64727 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VclQ64727 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
VclQ64727 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VclQ64727 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VclQ64727 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VclQ64727 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VclQ64727 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
VclQ64727 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.58■□□□□ 0.56
VclQ64727 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VclQ64727 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
VclQ64727 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VclQ64727 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.57■□□□□ 0.56
VclQ64727 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.57■□□□□ 0.56
VclQ64727 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.57■□□□□ 0.56
VclQ64727 Gm7514-201ENSMUST00000209475 934 ntBASIC18.57■□□□□ 0.56
VclQ64727 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VclQ64727 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VclQ64727 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VclQ64727 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VclQ64727 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Gm13146-201ENSMUST00000118508 780 ntBASIC18.56■□□□□ 0.56
VclQ64727 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VclQ64727 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.56■□□□□ 0.56
VclQ64727 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VclQ64727 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VclQ64727 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.56■□□□□ 0.56
VclQ64727 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VclQ64727 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VclQ64727 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VclQ64727 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms