Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zfp248Q640N4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.39□□□□□ -0.11
Zfp248Q640N4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Gm12251-201ENSMUST00000117893 792 ntBASIC14.39□□□□□ -0.11
Zfp248Q640N4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zfp248Q640N4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Golph3-205ENSMUST00000228671 2842 ntBASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.38□□□□□ -0.11
Zfp248Q640N4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.38□□□□□ -0.11
Zfp248Q640N4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zfp248Q640N4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.37□□□□□ -0.11
Zfp248Q640N4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zfp248Q640N4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.36□□□□□ -0.11
Zfp248Q640N4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.36□□□□□ -0.11
Zfp248Q640N4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Gm21956-201ENSMUST00000179946 522 ntBASIC14.36□□□□□ -0.11
Zfp248Q640N4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Zfp248Q640N4 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.36□□□□□ -0.11
Zfp248Q640N4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Zfp248Q640N4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms