Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim21Q62191 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim21Q62191 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim21Q62191 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim21Q62191 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim21Q62191 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim21Q62191 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim21Q62191 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trim21Q62191 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Trim21Q62191 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim21Q62191 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim21Q62191 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Trim21Q62191 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trim21Q62191 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim21Q62191 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim21Q62191 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.94■□□□□ 0.78
Trim21Q62191 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim21Q62191 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim21Q62191 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim21Q62191 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim21Q62191 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim21Q62191 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim21Q62191 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Trim21Q62191 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim21Q62191 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim21Q62191 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim21Q62191 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim21Q62191 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trim21Q62191 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim21Q62191 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.92■□□□□ 0.78
Trim21Q62191 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 BC021767-201ENSMUST00000126387 1716 ntBASIC19.91■□□□□ 0.78
Trim21Q62191 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim21Q62191 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim21Q62191 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim21Q62191 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim21Q62191 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.91■□□□□ 0.78
Trim21Q62191 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim21Q62191 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Trim21Q62191 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Smad6-203ENSMUST00000179458 273 ntBASIC19.9■□□□□ 0.78
Trim21Q62191 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.9■□□□□ 0.78
Trim21Q62191 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim21Q62191 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim21Q62191 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim21Q62191 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms