Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd53Q61451 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.42■□□□□ 0.38
Cd53Q61451 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.42■□□□□ 0.38
Cd53Q61451 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd53Q61451 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Gm7291-201ENSMUST00000199147 382 ntBASIC17.41■□□□□ 0.38
Cd53Q61451 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.41■□□□□ 0.38
Cd53Q61451 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd53Q61451 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd53Q61451 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cd53Q61451 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd53Q61451 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd53Q61451 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd53Q61451 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cd53Q61451 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Cd53Q61451 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cd53Q61451 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Cd53Q61451 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Cd53Q61451 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cd53Q61451 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cd53Q61451 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd53Q61451 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cd53Q61451 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cd53Q61451 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.38■□□□□ 0.37
Cd53Q61451 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.38■□□□□ 0.37
Cd53Q61451 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd53Q61451 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Cd53Q61451 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cd53Q61451 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cd53Q61451 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.37■□□□□ 0.37
Cd53Q61451 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.37■□□□□ 0.37
Cd53Q61451 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd53Q61451 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.37■□□□□ 0.37
Cd53Q61451 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd53Q61451 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cd53Q61451 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Cd53Q61451 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd53Q61451 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.36■□□□□ 0.37
Cd53Q61451 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.36■□□□□ 0.37
Cd53Q61451 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cd53Q61451 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cd53Q61451 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd53Q61451 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cd53Q61451 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.36■□□□□ 0.37
Cd53Q61451 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd53Q61451 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd53Q61451 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms