Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Atp13a4Q5XF90 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a4Q5XF90 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atp13a4Q5XF90 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a4Q5XF90 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a4Q5XF90 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a4Q5XF90 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Gm10493-201ENSMUST00000097270 612 ntBASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a4Q5XF90 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Atp13a4Q5XF90 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atp13a4Q5XF90 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atp13a4Q5XF90 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a4Q5XF90 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a4Q5XF90 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a4Q5XF90 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.48■□□□□ 0.87
Atp13a4Q5XF90 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atp13a4Q5XF90 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms