Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav7d-3Q5R1I1 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.9□□□□□ -0.19
Trav7d-3Q5R1I1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav7d-3Q5R1I1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Serp2-204ENSMUST00000228055 705 ntBASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav7d-3Q5R1I1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav7d-3Q5R1I1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-3Q5R1I1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Spcs1-204ENSMUST00000226782 949 ntBASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-3Q5R1I1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms