Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nlrc4Q3UP24 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nlrc4Q3UP24 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Gm27405-201ENSMUST00000184201 112 ntBASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nlrc4Q3UP24 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Nlrc4Q3UP24 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Gm7291-201ENSMUST00000199147 382 ntBASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Gm7514-201ENSMUST00000209475 934 ntBASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nlrc4Q3UP24 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nlrc4Q3UP24 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nlrc4Q3UP24 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nlrc4Q3UP24 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nlrc4Q3UP24 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nlrc4Q3UP24 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nlrc4Q3UP24 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms