Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Spg7Q3ULF4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.69■■□□□ 1.22
Spg7Q3ULF4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Spg7Q3ULF4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.68■■□□□ 1.22
Spg7Q3ULF4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Gm8520-201ENSMUST00000186517 868 ntBASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Spg7Q3ULF4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Spg7Q3ULF4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Spg7Q3ULF4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Spg7Q3ULF4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Spg7Q3ULF4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Spg7Q3ULF4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Gm22240-201ENSMUST00000175225 82 ntBASIC22.65■■□□□ 1.22
Spg7Q3ULF4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Spg7Q3ULF4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Spg7Q3ULF4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Spg7Q3ULF4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Spg7Q3ULF4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
Spg7Q3ULF4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Spg7Q3ULF4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Spg7Q3ULF4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Spg7Q3ULF4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Spg7Q3ULF4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Gm37856-201ENSMUST00000191634 999 ntBASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Spg7Q3ULF4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Spg7Q3ULF4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms