Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Gm38205-201ENSMUST00000192243 258 ntBASIC20.23■□□□□ 0.83
Trim72Q1XH17 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Gm9988-201ENSMUST00000069786 435 ntBASIC20.23■□□□□ 0.83
Trim72Q1XH17 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim72Q1XH17 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim72Q1XH17 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.22■□□□□ 0.83
Trim72Q1XH17 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim72Q1XH17 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.21■□□□□ 0.83
Trim72Q1XH17 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim72Q1XH17 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trim72Q1XH17 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Trim72Q1XH17 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim72Q1XH17 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim72Q1XH17 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Gm10493-201ENSMUST00000097270 612 ntBASIC20.19■□□□□ 0.82
Trim72Q1XH17 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim72Q1XH17 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim72Q1XH17 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.18■□□□□ 0.82
Trim72Q1XH17 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Reep4-203ENSMUST00000226563 1444 ntBASIC20.17■□□□□ 0.82
Trim72Q1XH17 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim72Q1XH17 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim72Q1XH17 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms