Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb1P70662 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb1P70662 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.89■□□□□ 0.61
Ldb1P70662 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ldb1P70662 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.88■□□□□ 0.61
Ldb1P70662 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.88■□□□□ 0.61
Ldb1P70662 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.88■□□□□ 0.61
Ldb1P70662 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ldb1P70662 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ldb1P70662 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ldb1P70662 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.88■□□□□ 0.61
Ldb1P70662 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ldb1P70662 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ldb1P70662 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.87■□□□□ 0.61
Ldb1P70662 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.87■□□□□ 0.61
Ldb1P70662 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ldb1P70662 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ldb1P70662 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ldb1P70662 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Ldb1P70662 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ldb1P70662 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ldb1P70662 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ldb1P70662 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ldb1P70662 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
Ldb1P70662 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ldb1P70662 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.84■□□□□ 0.61
Ldb1P70662 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ldb1P70662 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
Ldb1P70662 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Gm7860-201ENSMUST00000121190 879 ntBASIC18.84■□□□□ 0.61
Ldb1P70662 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ldb1P70662 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ldb1P70662 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ldb1P70662 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ldb1P70662 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ldb1P70662 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ldb1P70662 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ldb1P70662 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.83■□□□□ 0.6
Ldb1P70662 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ldb1P70662 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.82■□□□□ 0.6
Ldb1P70662 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.82■□□□□ 0.6
Ldb1P70662 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ldb1P70662 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.82■□□□□ 0.6
Ldb1P70662 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ldb1P70662 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.82■□□□□ 0.6
Ldb1P70662 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 269.1 ms