Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cks1bP61025 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.49□□□□□ -0.25
Cks1bP61025 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cks1bP61025 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Gm11175-201ENSMUST00000116172 543 ntBASIC13.49□□□□□ -0.25
Cks1bP61025 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.49□□□□□ -0.25
Cks1bP61025 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cks1bP61025 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.49□□□□□ -0.25
Cks1bP61025 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cks1bP61025 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1bP61025 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.48□□□□□ -0.25
Cks1bP61025 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cks1bP61025 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1bP61025 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cks1bP61025 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.47□□□□□ -0.25
Cks1bP61025 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cks1bP61025 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1bP61025 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cks1bP61025 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Mir6538-201ENSMUST00000183713 110 ntBASIC13.46□□□□□ -0.25
Cks1bP61025 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.46□□□□□ -0.25
Cks1bP61025 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1bP61025 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cks1bP61025 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.46□□□□□ -0.25
Cks1bP61025 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1bP61025 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1bP61025 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.46□□□□□ -0.26
Cks1bP61025 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1bP61025 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1bP61025 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1bP61025 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.45□□□□□ -0.26
Cks1bP61025 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1bP61025 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.45□□□□□ -0.26
Cks1bP61025 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms