Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Gm15546-201ENSMUST00000122095 826 ntBASIC15.31■□□□□ 0.04
Sssca1P56873 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.31■□□□□ 0.04
Sssca1P56873 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sssca1P56873 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sssca1P56873 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.31■□□□□ 0.04
Sssca1P56873 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sssca1P56873 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sssca1P56873 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.3■□□□□ 0.04
Sssca1P56873 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sssca1P56873 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.3■□□□□ 0.04
Sssca1P56873 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.3■□□□□ 0.04
Sssca1P56873 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Gm5812-201ENSMUST00000061073 957 ntBASIC15.3■□□□□ 0.04
Sssca1P56873 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sssca1P56873 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sssca1P56873 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sssca1P56873 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sssca1P56873 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.29■□□□□ 0.04
Sssca1P56873 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.29■□□□□ 0.04
Sssca1P56873 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sssca1P56873 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.29■□□□□ 0.04
Sssca1P56873 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sssca1P56873 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sssca1P56873 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Sssca1P56873 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sssca1P56873 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sssca1P56873 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sssca1P56873 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sssca1P56873 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sssca1P56873 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sssca1P56873 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.27■□□□□ 0.04
Sssca1P56873 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sssca1P56873 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Sssca1P56873 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Sssca1P56873 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sssca1P56873 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.26■□□□□ 0.03
Sssca1P56873 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Sssca1P56873 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sssca1P56873 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sssca1P56873 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.26■□□□□ 0.03
Sssca1P56873 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.26■□□□□ 0.03
Sssca1P56873 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.26■□□□□ 0.03
Sssca1P56873 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.26■□□□□ 0.03
Sssca1P56873 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.26■□□□□ 0.03
Sssca1P56873 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Sssca1P56873 Gm9959-201ENSMUST00000068277 390 ntBASIC15.26■□□□□ 0.03
Sssca1P56873 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sssca1P56873 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms