Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox3P53784 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Sox3P53784 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox3P53784 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sox3P53784 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox3P53784 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox3P53784 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sox3P53784 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.08■□□□□ 0.48
Sox3P53784 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.08■□□□□ 0.48
Sox3P53784 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.08■□□□□ 0.48
Sox3P53784 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox3P53784 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sox3P53784 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox3P53784 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox3P53784 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.07■□□□□ 0.48
Sox3P53784 Mir6982-201ENSMUST00000184354 68 ntBASIC18.07■□□□□ 0.48
Sox3P53784 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.07■□□□□ 0.48
Sox3P53784 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sox3P53784 Gm10812-201ENSMUST00000099864 546 ntBASIC18.07■□□□□ 0.48
Sox3P53784 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sox3P53784 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Sox3P53784 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox3P53784 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Sox3P53784 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox3P53784 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.05■□□□□ 0.48
Sox3P53784 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox3P53784 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox3P53784 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.05■□□□□ 0.48
Sox3P53784 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox3P53784 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sox3P53784 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sox3P53784 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.04■□□□□ 0.48
Sox3P53784 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox3P53784 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox3P53784 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Sox3P53784 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.03■□□□□ 0.48
Sox3P53784 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sox3P53784 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sox3P53784 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.03■□□□□ 0.48
Sox3P53784 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Gm20049-201ENSMUST00000219950 730 ntBASIC18.03■□□□□ 0.48
Sox3P53784 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.03■□□□□ 0.48
Sox3P53784 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sox3P53784 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.03■□□□□ 0.48
Sox3P53784 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox3P53784 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sox3P53784 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.02■□□□□ 0.48
Sox3P53784 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sox3P53784 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox3P53784 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sox3P53784 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms