Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.32■□□□□ 0.52
Hnf4aP49698 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Hnf4aP49698 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.32■□□□□ 0.52
Hnf4aP49698 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hnf4aP49698 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.32■□□□□ 0.52
Hnf4aP49698 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hnf4aP49698 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hnf4aP49698 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hnf4aP49698 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hnf4aP49698 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.31■□□□□ 0.52
Hnf4aP49698 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hnf4aP49698 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hnf4aP49698 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hnf4aP49698 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Gm40848-201ENSMUST00000221998 324 ntBASIC18.3■□□□□ 0.52
Hnf4aP49698 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.3■□□□□ 0.52
Hnf4aP49698 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hnf4aP49698 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hnf4aP49698 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hnf4aP49698 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hnf4aP49698 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.29■□□□□ 0.52
Hnf4aP49698 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hnf4aP49698 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnf4aP49698 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.29■□□□□ 0.52
Hnf4aP49698 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hnf4aP49698 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hnf4aP49698 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.28■□□□□ 0.52
Hnf4aP49698 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hnf4aP49698 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hnf4aP49698 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hnf4aP49698 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hnf4aP49698 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.27■□□□□ 0.52
Hnf4aP49698 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnf4aP49698 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hnf4aP49698 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hnf4aP49698 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hnf4aP49698 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hnf4aP49698 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
Hnf4aP49698 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Hnf4aP49698 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Hnf4aP49698 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnf4aP49698 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms