Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A12P48065 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 TSPY26P-201ENST00000476365 1326 ntBASIC20.8■□□□□ 0.92
SLC6A12P48065 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLC6A12P48065 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A12P48065 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC6A12P48065 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 AC091305.1-201ENST00000479476 895 ntBASIC20.8■□□□□ 0.92
SLC6A12P48065 SUDS3P1-201ENST00000505831 966 ntBASIC20.8■□□□□ 0.92
SLC6A12P48065 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC6A12P48065 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC6A12P48065 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A12P48065 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A12P48065 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
SLC6A12P48065 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A12P48065 AC244015.2-201ENST00000616358 1861 ntBASIC20.79■□□□□ 0.92
SLC6A12P48065 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC6A12P48065 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC6A12P48065 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC6A12P48065 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC6A12P48065 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SLC6A12P48065 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC6A12P48065 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A12P48065 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A12P48065 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC6A12P48065 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC6A12P48065 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A12P48065 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC6A12P48065 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC6A12P48065 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A12P48065 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A12P48065 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC6A12P48065 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC6A12P48065 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A12P48065 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC6A12P48065 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC6A12P48065 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC6A12P48065 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.77■□□□□ 0.91
SLC6A12P48065 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC6A12P48065 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A12P48065 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC6A12P48065 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC6A12P48065 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC6A12P48065 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A12P48065 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC6A12P48065 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC6A12P48065 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC6A12P48065 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SLC6A12P48065 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC6A12P48065 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC6A12P48065 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A12P48065 AC007375.3-201ENST00000600936 2314 ntBASIC20.75■□□□□ 0.91
SLC6A12P48065 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SLC6A12P48065 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC6A12P48065 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC6A12P48065 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC6A12P48065 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A12P48065 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A12P48065 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC6A12P48065 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A12P48065 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A12P48065 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC6A12P48065 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC6A12P48065 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC6A12P48065 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A12P48065 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 AP006587.3-201ENST00000525742 1516 ntBASIC20.74■□□□□ 0.91
SLC6A12P48065 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A12P48065 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC6A12P48065 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC6A12P48065 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC6A12P48065 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms