Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Foxa1P35582 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Foxa1P35582 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxa1P35582 Gm13234-201ENSMUST00000120010 747 ntBASIC17.54■□□□□ 0.4
Foxa1P35582 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Foxa1P35582 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.54■□□□□ 0.4
Foxa1P35582 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.54■□□□□ 0.4
Foxa1P35582 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxa1P35582 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Foxa1P35582 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.53■□□□□ 0.4
Foxa1P35582 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxa1P35582 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.53■□□□□ 0.4
Foxa1P35582 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxa1P35582 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Foxa1P35582 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxa1P35582 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxa1P35582 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxa1P35582 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Foxa1P35582 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Foxa1P35582 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Foxa1P35582 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.52■□□□□ 0.4
Foxa1P35582 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.52■□□□□ 0.4
Foxa1P35582 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Foxa1P35582 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Foxa1P35582 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Foxa1P35582 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Foxa1P35582 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Foxa1P35582 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Foxa1P35582 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Foxa1P35582 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Foxa1P35582 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Gm42642-201ENSMUST00000200683 355 ntBASIC17.51■□□□□ 0.39
Foxa1P35582 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.51■□□□□ 0.39
Foxa1P35582 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxa1P35582 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxa1P35582 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.5■□□□□ 0.39
Foxa1P35582 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Foxa1P35582 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Iqck-206ENSMUST00000208658 2891 ntBASIC17.49■□□□□ 0.39
Foxa1P35582 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Foxa1P35582 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.49■□□□□ 0.39
Foxa1P35582 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Foxa1P35582 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Foxa1P35582 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxa1P35582 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.48■□□□□ 0.39
Foxa1P35582 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxa1P35582 Gm8495-201ENSMUST00000188740 694 ntBASIC17.48■□□□□ 0.39
Foxa1P35582 Gm18671-201ENSMUST00000214826 683 ntBASIC17.48■□□□□ 0.39
Foxa1P35582 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.48■□□□□ 0.39
Foxa1P35582 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxa1P35582 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxa1P35582 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxa1P35582 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxa1P35582 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.47■□□□□ 0.39
Foxa1P35582 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.47■□□□□ 0.39
Foxa1P35582 Gm10033-202ENSMUST00000211874 928 ntBASIC17.47■□□□□ 0.39
Foxa1P35582 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxa1P35582 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Gm13146-201ENSMUST00000118508 780 ntBASIC17.46■□□□□ 0.39
Foxa1P35582 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxa1P35582 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms