Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1bP25119 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 AV356131-201ENSMUST00000206201 750 ntBASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1bP25119 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1bP25119 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf1bP25119 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Tnfrsf1bP25119 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Gm13146-201ENSMUST00000118508 780 ntBASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf1bP25119 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1bP25119 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Tnfrsf1bP25119 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1bP25119 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms