Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PdgfrbP05622 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PdgfrbP05622 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PdgfrbP05622 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PdgfrbP05622 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PdgfrbP05622 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PdgfrbP05622 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.14■□□□□ 0.65
PdgfrbP05622 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PdgfrbP05622 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PdgfrbP05622 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PdgfrbP05622 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PdgfrbP05622 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.14■□□□□ 0.65
PdgfrbP05622 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.14■□□□□ 0.65
PdgfrbP05622 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.14■□□□□ 0.65
PdgfrbP05622 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Gm38205-201ENSMUST00000192243 258 ntBASIC19.13■□□□□ 0.65
PdgfrbP05622 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PdgfrbP05622 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PdgfrbP05622 Golph3-205ENSMUST00000228671 2842 ntBASIC19.13■□□□□ 0.65
PdgfrbP05622 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Gm9988-201ENSMUST00000069786 435 ntBASIC19.12■□□□□ 0.65
PdgfrbP05622 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PdgfrbP05622 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PdgfrbP05622 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PdgfrbP05622 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.12■□□□□ 0.65
PdgfrbP05622 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.11■□□□□ 0.65
PdgfrbP05622 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.11■□□□□ 0.65
PdgfrbP05622 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PdgfrbP05622 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PdgfrbP05622 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.1■□□□□ 0.65
PdgfrbP05622 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.1■□□□□ 0.65
PdgfrbP05622 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PdgfrbP05622 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PdgfrbP05622 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PdgfrbP05622 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.09■□□□□ 0.65
PdgfrbP05622 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PdgfrbP05622 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.09■□□□□ 0.65
PdgfrbP05622 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.08■□□□□ 0.65
PdgfrbP05622 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PdgfrbP05622 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PdgfrbP05622 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PdgfrbP05622 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PdgfrbP05622 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.08■□□□□ 0.64
PdgfrbP05622 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PdgfrbP05622 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PdgfrbP05622 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PdgfrbP05622 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PdgfrbP05622 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PdgfrbP05622 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms