Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.27■□□□□ 0.36
P01852 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P01852 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.27■□□□□ 0.36
P01852 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.27■□□□□ 0.36
P01852 Gm10849-201ENSMUST00000100397 618 ntBASIC17.27■□□□□ 0.36
P01852 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.27■□□□□ 0.36
P01852 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01852 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
P01852 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
P01852 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01852 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
P01852 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Gm42569-201ENSMUST00000200539 472 ntBASIC17.26■□□□□ 0.35
P01852 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.26■□□□□ 0.35
P01852 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01852 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Gm26571-201ENSMUST00000181399 666 ntBASIC17.25■□□□□ 0.35
P01852 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.25■□□□□ 0.35
P01852 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.25■□□□□ 0.35
P01852 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.25■□□□□ 0.35
P01852 AV356131-201ENSMUST00000206201 750 ntBASIC17.25■□□□□ 0.35
P01852 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P01852 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.25■□□□□ 0.35
P01852 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01852 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01852 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01852 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.24■□□□□ 0.35
P01852 Gm7860-201ENSMUST00000121190 879 ntBASIC17.24■□□□□ 0.35
P01852 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.24■□□□□ 0.35
P01852 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.24■□□□□ 0.35
P01852 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01852 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.24■□□□□ 0.35
P01852 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01852 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01852 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.24■□□□□ 0.35
P01852 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.23■□□□□ 0.35
P01852 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.23■□□□□ 0.35
P01852 Gm38205-201ENSMUST00000192243 258 ntBASIC17.23■□□□□ 0.35
P01852 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.23■□□□□ 0.35
P01852 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01852 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.23■□□□□ 0.35
P01852 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P01852 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.22■□□□□ 0.35
P01852 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P01852 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01852 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
P01852 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01852 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01852 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01852 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.21■□□□□ 0.35
P01852 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
P01852 Gm13146-201ENSMUST00000118508 780 ntBASIC17.21■□□□□ 0.35
P01852 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
P01852 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms