Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcr3O88410 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cxcr3O88410 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.02■□□□□ 0.64
Cxcr3O88410 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcr3O88410 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcr3O88410 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcr3O88410 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcr3O88410 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcr3O88410 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Gm13146-201ENSMUST00000118508 780 ntBASIC19.01■□□□□ 0.63
Cxcr3O88410 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcr3O88410 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.01■□□□□ 0.63
Cxcr3O88410 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcr3O88410 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcr3O88410 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcr3O88410 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cxcr3O88410 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19■□□□□ 0.63
Cxcr3O88410 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cxcr3O88410 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19■□□□□ 0.63
Cxcr3O88410 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19■□□□□ 0.63
Cxcr3O88410 AC112142.1-201ENSMUST00000228796 918 ntBASIC19■□□□□ 0.63
Cxcr3O88410 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cxcr3O88410 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cxcr3O88410 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cxcr3O88410 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcr3O88410 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcr3O88410 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.99■□□□□ 0.63
Cxcr3O88410 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.99■□□□□ 0.63
Cxcr3O88410 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcr3O88410 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cxcr3O88410 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cxcr3O88410 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcr3O88410 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcr3O88410 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.99■□□□□ 0.63
Cxcr3O88410 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cxcr3O88410 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Golph3-202ENSMUST00000226517 2359 ntBASIC18.98■□□□□ 0.63
Cxcr3O88410 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.98■□□□□ 0.63
Cxcr3O88410 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Cxcr3O88410 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cxcr3O88410 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cxcr3O88410 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcr3O88410 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cxcr3O88410 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cxcr3O88410 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cxcr3O88410 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cxcr3O88410 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.97■□□□□ 0.63
Cxcr3O88410 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.97■□□□□ 0.63
Cxcr3O88410 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.97■□□□□ 0.63
Cxcr3O88410 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Notumos-201ENSMUST00000151998 2659 ntBASIC18.97■□□□□ 0.63
Cxcr3O88410 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcr3O88410 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.96■□□□□ 0.63
Cxcr3O88410 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.96■□□□□ 0.63
Cxcr3O88410 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.96■□□□□ 0.63
Cxcr3O88410 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Cxcr3O88410 Gm10602-201ENSMUST00000098239 609 ntBASIC18.96■□□□□ 0.63
Cxcr3O88410 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.96■□□□□ 0.63
Cxcr3O88410 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcr3O88410 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.95■□□□□ 0.62
Cxcr3O88410 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms