Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Gm5643-201ENSMUST00000117081 966 ntBASIC18.07■□□□□ 0.48
Tgfbr3O88393 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tgfbr3O88393 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tgfbr3O88393 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tgfbr3O88393 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.05■□□□□ 0.48
Tgfbr3O88393 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.05■□□□□ 0.48
Tgfbr3O88393 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tgfbr3O88393 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Dio3-201ENSMUST00000097228 1449 ntBASIC18.04■□□□□ 0.48
Tgfbr3O88393 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
Tgfbr3O88393 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tgfbr3O88393 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tgfbr3O88393 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.04■□□□□ 0.48
Tgfbr3O88393 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Gm22325-201ENSMUST00000158904 308 ntBASIC18.03■□□□□ 0.48
Tgfbr3O88393 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tgfbr3O88393 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.02■□□□□ 0.48
Tgfbr3O88393 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.02■□□□□ 0.48
Tgfbr3O88393 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tgfbr3O88393 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tgfbr3O88393 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tgfbr3O88393 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tgfbr3O88393 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tgfbr3O88393 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tgfbr3O88393 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tgfbr3O88393 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
Tgfbr3O88393 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms