Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim1O70400 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim1O70400 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.71■□□□□ 0.59
Pdlim1O70400 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Pdlim1O70400 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.71■□□□□ 0.59
Pdlim1O70400 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.71■□□□□ 0.59
Pdlim1O70400 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim1O70400 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Gm26571-201ENSMUST00000181399 666 ntBASIC18.7■□□□□ 0.58
Pdlim1O70400 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.7■□□□□ 0.58
Pdlim1O70400 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pdlim1O70400 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim1O70400 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Pdlim1O70400 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim1O70400 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Gm42569-201ENSMUST00000200539 472 ntBASIC18.68■□□□□ 0.58
Pdlim1O70400 Gm7514-201ENSMUST00000209475 934 ntBASIC18.68■□□□□ 0.58
Pdlim1O70400 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.68■□□□□ 0.58
Pdlim1O70400 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pdlim1O70400 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim1O70400 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pdlim1O70400 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pdlim1O70400 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pdlim1O70400 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.67■□□□□ 0.58
Pdlim1O70400 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim1O70400 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.67■□□□□ 0.58
Pdlim1O70400 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim1O70400 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim1O70400 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim1O70400 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms