Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh12O55134 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdh12O55134 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh12O55134 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh12O55134 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh12O55134 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh12O55134 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdh12O55134 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh12O55134 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdh12O55134 Gm27801-201ENSMUST00000184174 223 ntBASIC17.17■□□□□ 0.34
Pcdh12O55134 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.17■□□□□ 0.34
Pcdh12O55134 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh12O55134 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcdh12O55134 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Gm5874-201ENSMUST00000096101 508 ntBASIC17.16■□□□□ 0.34
Pcdh12O55134 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh12O55134 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdh12O55134 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.15■□□□□ 0.34
Pcdh12O55134 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdh12O55134 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.15■□□□□ 0.34
Pcdh12O55134 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh12O55134 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.14■□□□□ 0.34
Pcdh12O55134 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh12O55134 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh12O55134 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh12O55134 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh12O55134 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh12O55134 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh12O55134 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh12O55134 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh12O55134 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.13■□□□□ 0.33
Pcdh12O55134 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh12O55134 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh12O55134 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh12O55134 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.12■□□□□ 0.33
Pcdh12O55134 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.12■□□□□ 0.33
Pcdh12O55134 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh12O55134 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh12O55134 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdh12O55134 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Pcdh12O55134 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh12O55134 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms