Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Kcnu1O54982 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Kcnu1O54982 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.23■□□□□ 0.83
Kcnu1O54982 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Kcnu1O54982 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Kcnu1O54982 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.23■□□□□ 0.83
Kcnu1O54982 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Kcnu1O54982 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcnu1O54982 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.22■□□□□ 0.83
Kcnu1O54982 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Gm26833-201ENSMUST00000180899 440 ntBASIC20.22■□□□□ 0.83
Kcnu1O54982 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcnu1O54982 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Kcnu1O54982 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Kcnu1O54982 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kcnu1O54982 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.2■□□□□ 0.82
Kcnu1O54982 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Kcnu1O54982 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Kcnu1O54982 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcnu1O54982 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnu1O54982 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnu1O54982 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnu1O54982 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Kcnu1O54982 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.19■□□□□ 0.82
Kcnu1O54982 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnu1O54982 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcnu1O54982 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
Kcnu1O54982 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.18■□□□□ 0.82
Kcnu1O54982 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcnu1O54982 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Kcnu1O54982 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Kcnu1O54982 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.17■□□□□ 0.82
Kcnu1O54982 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Kcnu1O54982 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kcnu1O54982 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnu1O54982 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnu1O54982 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnu1O54982 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Kcnu1O54982 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnu1O54982 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kcnu1O54982 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms