Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.43■□□□□ 0.7
Ercc2O08811 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ercc2O08811 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Ercc2O08811 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.42■□□□□ 0.7
Ercc2O08811 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ercc2O08811 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc2O08811 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.41■□□□□ 0.7
Ercc2O08811 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ercc2O08811 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Ercc2O08811 Gm15039-201ENSMUST00000118914 875 ntBASIC19.41■□□□□ 0.7
Ercc2O08811 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.41■□□□□ 0.7
Ercc2O08811 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.41■□□□□ 0.7
Ercc2O08811 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.41■□□□□ 0.7
Ercc2O08811 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.41■□□□□ 0.7
Ercc2O08811 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
Ercc2O08811 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc2O08811 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.41■□□□□ 0.7
Ercc2O08811 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ercc2O08811 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.4■□□□□ 0.7
Ercc2O08811 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ercc2O08811 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc2O08811 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ercc2O08811 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ercc2O08811 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ercc2O08811 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.39■□□□□ 0.69
Ercc2O08811 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.39■□□□□ 0.69
Ercc2O08811 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc2O08811 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc2O08811 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc2O08811 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ercc2O08811 Gm13234-201ENSMUST00000120010 747 ntBASIC19.38■□□□□ 0.69
Ercc2O08811 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.38■□□□□ 0.69
Ercc2O08811 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.38■□□□□ 0.69
Ercc2O08811 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc2O08811 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc2O08811 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Ercc2O08811 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc2O08811 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.37■□□□□ 0.69
Ercc2O08811 Gm42778-201ENSMUST00000199644 553 ntBASIC19.37■□□□□ 0.69
Ercc2O08811 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.37■□□□□ 0.69
Ercc2O08811 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Gm5874-201ENSMUST00000096101 508 ntBASIC19.37■□□□□ 0.69
Ercc2O08811 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ercc2O08811 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc2O08811 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ercc2O08811 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ercc2O08811 Gm13146-201ENSMUST00000118508 780 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms