Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm10553J3QPF1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Notumos-201ENSMUST00000151998 2659 ntBASIC14.47□□□□□ -0.09
Gm10553J3QPF1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Gm10849-201ENSMUST00000100397 618 ntBASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm10553J3QPF1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gm10553J3QPF1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Gm10553J3QPF1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm10553J3QPF1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Gm7291-201ENSMUST00000199147 382 ntBASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm10553J3QPF1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Gm27405-201ENSMUST00000184201 112 ntBASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Gm7514-201ENSMUST00000209475 934 ntBASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm10553J3QPF1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms