Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim34bJ3QNR8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Rab3c-203ENSMUST00000224180 967 ntBASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim34bJ3QNR8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim34bJ3QNR8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trim34bJ3QNR8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim34bJ3QNR8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim34bJ3QNR8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim34bJ3QNR8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Gm22240-201ENSMUST00000175225 82 ntBASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Gm8520-201ENSMUST00000186517 868 ntBASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim34bJ3QNR8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim34bJ3QNR8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Trim34bJ3QNR8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim34bJ3QNR8 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.2■■□□□ 1.3
Trim34bJ3QNR8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim34bJ3QNR8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim34bJ3QNR8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms