Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh9F8VPK8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh9F8VPK8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh9F8VPK8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh9F8VPK8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh9F8VPK8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh9F8VPK8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh9F8VPK8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh9F8VPK8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pcdh9F8VPK8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdh9F8VPK8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Gm45417-201ENSMUST00000209533 758 ntBASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh9F8VPK8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh9F8VPK8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Smad6-203ENSMUST00000179458 273 ntBASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh9F8VPK8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh9F8VPK8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms