Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim30bE9PVL6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Gm27275-201ENSMUST00000184318 272 ntBASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim30bE9PVL6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trim30bE9PVL6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim30bE9PVL6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim30bE9PVL6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim30bE9PVL6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim30bE9PVL6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Gm12896-201ENSMUST00000118430 226 ntBASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Gm10812-201ENSMUST00000099864 546 ntBASIC20.24■□□□□ 0.83
Trim30bE9PVL6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim30bE9PVL6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim30bE9PVL6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim30bE9PVL6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim30bE9PVL6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms