Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn1aA2APX8 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.02■□□□□ 0.8
Scn1aA2APX8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.02■□□□□ 0.79
Scn1aA2APX8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.01■□□□□ 0.79
Scn1aA2APX8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn1aA2APX8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn1aA2APX8 Gm5297-201ENSMUST00000198555 1171 ntBASIC20■□□□□ 0.79
Scn1aA2APX8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Gm4968-201ENSMUST00000071458 858 ntBASIC20■□□□□ 0.79
Scn1aA2APX8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn1aA2APX8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn1aA2APX8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.98■□□□□ 0.79
Scn1aA2APX8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn1aA2APX8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.97■□□□□ 0.79
Scn1aA2APX8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn1aA2APX8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Gm12441-201ENSMUST00000121806 588 ntBASIC19.96■□□□□ 0.79
Scn1aA2APX8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn1aA2APX8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn1aA2APX8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms