Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm3854A0A1B0GSS6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.02■□□□□ 0.64
Gm3854A0A1B0GSS6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Gm3854A0A1B0GSS6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Mir7071-201ENSMUST00000184847 69 ntBASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gm3854A0A1B0GSS6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Gm3854A0A1B0GSS6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3854A0A1B0GSS6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3854A0A1B0GSS6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3854A0A1B0GSS6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Mir6982-201ENSMUST00000184354 68 ntBASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3854A0A1B0GSS6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms