Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21956-201ENSMUST00000179946 522 ntBASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13241-201ENSMUST00000094493 780 ntBASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad6-203ENSMUST00000179458 273 ntBASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir7075-201ENSMUST00000184187 82 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms