Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV1D-43A0A0B4J1Z2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.02■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 EDA-201ENST00000338901 1233 ntBASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 IGHV3-19-201ENST00000521488 291 ntBASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AF213884.3-201ENST00000563833 479 ntBASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AL137060.1-201ENST00000618151 2648 ntBASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC027682.1-201ENST00000562846 899 ntBASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SMUG1P1-201ENST00000590640 811 ntBASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AP004607.7-201ENST00000527152 1677 ntBASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC026310.3-201ENST00000625186 2373 ntBASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MIR939-201ENST00000401314 82 ntBASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AL355001.2-201ENST00000620617 1191 ntBASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AL139246.5-201ENST00000606645 996 ntBASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AL136967.2-201ENST00000623968 743 ntBASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 TSPY26P-201ENST00000476365 1326 ntBASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC244015.2-201ENST00000616358 1861 ntBASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
IGKV1D-43A0A0B4J1Z2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms