Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav19A0A0B4J1K4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav19A0A0B4J1K4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Gm15820-201ENSMUST00000201566 728 ntBASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav19A0A0B4J1K4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav19A0A0B4J1K4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.16□□□□□ -0.14
Trav19A0A0B4J1K4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav19A0A0B4J1K4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav19A0A0B4J1K4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav19A0A0B4J1K4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms