Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16nA0A075B634 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav16nA0A075B634 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16nA0A075B634 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16nA0A075B634 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16nA0A075B634 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16nA0A075B634 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16nA0A075B634 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.33□□□□□ -0.11
Trav16nA0A075B634 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16nA0A075B634 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav16nA0A075B634 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16nA0A075B634 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16nA0A075B634 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16nA0A075B634 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16nA0A075B634 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.32□□□□□ -0.12
Trav16nA0A075B634 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Rarb-207ENSMUST00000225921 2756 ntBASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16nA0A075B634 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.31□□□□□ -0.12
Trav16nA0A075B634 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms