Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4d-3A0A075B625 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Gm9806-201ENSMUST00000051080 552 ntBASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4d-3A0A075B625 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4d-3A0A075B625 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4d-3A0A075B625 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4d-3A0A075B625 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav4d-3A0A075B625 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms