Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6n-5A0A075B621 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6n-5A0A075B621 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Trav6n-5A0A075B621 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.71□□□□□ -0.06
Trav6n-5A0A075B621 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-5A0A075B621 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6n-5A0A075B621 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6n-5A0A075B621 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Gm45444-201ENSMUST00000211394 898 ntBASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6n-5A0A075B621 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.68□□□□□ -0.06
Trav6n-5A0A075B621 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6n-5A0A075B621 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms