Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Gm12728V9GX31 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.26■□□□□ 0.03
Gm12728V9GX31 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.26■□□□□ 0.03
Gm12728V9GX31 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm12728V9GX31 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm12728V9GX31 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.24■□□□□ 0.03
Gm12728V9GX31 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.24■□□□□ 0.03
Gm12728V9GX31 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.24■□□□□ 0.03
Gm12728V9GX31 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.24■□□□□ 0.03
Gm12728V9GX31 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm12728V9GX31 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm12728V9GX31 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.23■□□□□ 0.03
Gm12728V9GX31 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm12728V9GX31 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.22■□□□□ 0.03
Gm12728V9GX31 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm12728V9GX31 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12728V9GX31 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm12728V9GX31 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms