Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Iqck-206ENSMUST00000208658 2891 ntBASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Phtf1Q9QZ09 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Phtf1Q9QZ09 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Gm42569-201ENSMUST00000200539 472 ntBASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Phtf1Q9QZ09 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 Gm13534-201ENSMUST00000121169 513 ntBASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Phtf1Q9QZ09 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Phtf1Q9QZ09 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Phtf1Q9QZ09 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Gm27405-201ENSMUST00000184201 112 ntBASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Phtf1Q9QZ09 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Phtf1Q9QZ09 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.91■□□□□ 0.94
Phtf1Q9QZ09 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Phtf1Q9QZ09 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Gm7291-201ENSMUST00000199147 382 ntBASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Phtf1Q9QZ09 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Phtf1Q9QZ09 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.89■□□□□ 0.94
Phtf1Q9QZ09 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Phtf1Q9QZ09 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Phtf1Q9QZ09 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.89■□□□□ 0.94
Phtf1Q9QZ09 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.89■□□□□ 0.93
Phtf1Q9QZ09 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms