Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn5aQ9JJV9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn5aQ9JJV9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.83■□□□□ 0.77
Scn5aQ9JJV9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn5aQ9JJV9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Scn5aQ9JJV9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn5aQ9JJV9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.81■□□□□ 0.76
Scn5aQ9JJV9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn5aQ9JJV9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn5aQ9JJV9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Gm2399-201ENSMUST00000104944 225 ntBASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn5aQ9JJV9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Gm22325-201ENSMUST00000158904 308 ntBASIC19.77■□□□□ 0.76
Scn5aQ9JJV9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms