Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
NBPF3Q9H094 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.65■■□□□ 1.7
NBPF3Q9H094 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NBPF3Q9H094 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.65■■□□□ 1.7
NBPF3Q9H094 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
NBPF3Q9H094 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NBPF3Q9H094 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.65■■□□□ 1.7
NBPF3Q9H094 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.64■■□□□ 1.7
NBPF3Q9H094 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.64■■□□□ 1.7
NBPF3Q9H094 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.64■■□□□ 1.7
NBPF3Q9H094 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
NBPF3Q9H094 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.64■■□□□ 1.7
NBPF3Q9H094 AL354811.1-201ENST00000610286 706 ntBASIC25.64■■□□□ 1.7
NBPF3Q9H094 AL358852.1-201ENST00000623174 1268 ntBASIC25.64■■□□□ 1.7
NBPF3Q9H094 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
NBPF3Q9H094 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF3Q9H094 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF3Q9H094 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF3Q9H094 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NBPF3Q9H094 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
NBPF3Q9H094 AC027612.3-201ENST00000413684 1047 ntBASIC25.63■■□□□ 1.69
NBPF3Q9H094 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
NBPF3Q9H094 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NBPF3Q9H094 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NBPF3Q9H094 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 AC123595.1-201ENST00000440769 1046 ntBASIC25.62■■□□□ 1.69
NBPF3Q9H094 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF3Q9H094 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF3Q9H094 TPRG1LP1-201ENST00000598702 760 ntBASIC25.62■■□□□ 1.69
NBPF3Q9H094 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.62■■□□□ 1.69
NBPF3Q9H094 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
NBPF3Q9H094 OR7E47P-201ENST00000546390 1422 ntBASIC25.62■■□□□ 1.69
NBPF3Q9H094 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.62■■□□□ 1.69
NBPF3Q9H094 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NBPF3Q9H094 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 AC242852.2-201ENST00000615738 1807 ntBASIC25.61■■□□□ 1.69
NBPF3Q9H094 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.61■■□□□ 1.69
NBPF3Q9H094 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NBPF3Q9H094 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
NBPF3Q9H094 ECEL1P1-201ENST00000373592 1742 ntBASIC25.6■■□□□ 1.69
NBPF3Q9H094 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.6■■□□□ 1.69
NBPF3Q9H094 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NBPF3Q9H094 AL117328.2-201ENST00000624617 1940 ntBASIC25.59■■□□□ 1.69
NBPF3Q9H094 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF3Q9H094 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.59■■□□□ 1.69
NBPF3Q9H094 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.59■■□□□ 1.69
NBPF3Q9H094 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NBPF3Q9H094 EP400NL-214ENST00000641289 2402 ntBASIC25.59■■□□□ 1.69
NBPF3Q9H094 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
NBPF3Q9H094 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms