Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Gm7977-201ENSMUST00000193787 748 ntBASIC17.18■□□□□ 0.34
Barx1Q9ER42 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Barx1Q9ER42 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.18■□□□□ 0.34
Barx1Q9ER42 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.17■□□□□ 0.34
Barx1Q9ER42 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Barx1Q9ER42 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Barx1Q9ER42 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.15■□□□□ 0.34
Barx1Q9ER42 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Barx1Q9ER42 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Barx1Q9ER42 AA386476-201ENSMUST00000098781 1665 ntBASIC17.13■□□□□ 0.33
Barx1Q9ER42 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Gm6576-201ENSMUST00000169678 883 ntBASIC17.13■□□□□ 0.33
Barx1Q9ER42 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Barx1Q9ER42 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Barx1Q9ER42 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Barx1Q9ER42 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Gm13836-201ENSMUST00000121159 501 ntBASIC17.11■□□□□ 0.33
Barx1Q9ER42 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.11■□□□□ 0.33
Barx1Q9ER42 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Barx1Q9ER42 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms