Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ssr1Q9CY50 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Gm9847-201ENSMUST00000052528 599 ntBASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.53■□□□□ 0.88
Ssr1Q9CY50 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssr1Q9CY50 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssr1Q9CY50 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssr1Q9CY50 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ssr1Q9CY50 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.52■□□□□ 0.87
Ssr1Q9CY50 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssr1Q9CY50 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssr1Q9CY50 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssr1Q9CY50 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssr1Q9CY50 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssr1Q9CY50 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssr1Q9CY50 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ssr1Q9CY50 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssr1Q9CY50 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ssr1Q9CY50 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms