Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Mir6236-201ENSMUST00000184437 123 ntBASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smurf1Q9CUN6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Smurf1Q9CUN6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.27■□□□□ 0.36
Smurf1Q9CUN6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smurf1Q9CUN6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Smurf1Q9CUN6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smurf1Q9CUN6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smurf1Q9CUN6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Gm45102-201ENSMUST00000207427 857 ntBASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smurf1Q9CUN6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smurf1Q9CUN6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Gm7417-201ENSMUST00000192950 473 ntBASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smurf1Q9CUN6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smurf1Q9CUN6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms