Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.55■□□□□ 0.56
Trim16Q99PP9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim16Q99PP9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.54■□□□□ 0.56
Trim16Q99PP9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim16Q99PP9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Trim16Q99PP9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Gm43017-201ENSMUST00000198296 752 ntBASIC18.53■□□□□ 0.56
Trim16Q99PP9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim16Q99PP9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim16Q99PP9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.52■□□□□ 0.56
Trim16Q99PP9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim16Q99PP9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trim16Q99PP9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim16Q99PP9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim16Q99PP9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Smad6-203ENSMUST00000179458 273 ntBASIC18.5■□□□□ 0.55
Trim16Q99PP9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim16Q99PP9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim16Q99PP9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms